No. words: 1305; after pruning: 1279


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.0 (1,1:500)  483  0.00 0.20 0.20  BE637806Ld06P027C01P027C071F1_085.ab1        4   497 (136)  C BE637806Ld06P027C01P027C071R1_085.ab1   (174)   498     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE637806Ld06P027C01P027C071R1_085.ab1   672 
  293    BE637806Ld06P027C01P027C071F1_085.ab1   121 
  317  C BE637806Ld06P027C01P027C071R1_085.ab1   356 
  537    BE637806Ld06P027C01P027C071F1_085.ab1   365 
  613  C BE637806Ld06P027C01P027C071R1_085.ab1    60 
  617    BE637806Ld06P027C01P027C071F1_085.ab1   445 
Contig length: old 804, new 805

Contig length: old 805, new 805
New start: 0