No. words: 1060; after pruning: 1034


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.7 (1,1:493)  482  0.00 0.00 0.20  BE637806Tu01P027C01P027C071F1_053.ab1        3   491 (37)  C BE637806Tu01P027C01P027C071R1_053.ab1   (41)   491     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE637806Tu01P027C01P027C071R1_053.ab1   532 
  157    BE637806Tu01P027C01P027C071F1_053.ab1   118 
  161  C BE637806Tu01P027C01P027C071R1_053.ab1   372 
  233    BE637806Tu01P027C01P027C071F1_053.ab1   194 
  301  C BE637806Tu01P027C01P027C071R1_053.ab1   232 
  397    BE637806Tu01P027C01P027C071F1_053.ab1   358 
  405  C BE637806Tu01P027C01P027C071R1_053.ab1   128 
  409    BE637806Tu01P027C01P027C071F1_053.ab1   370 
Contig length: old 566, new 567

Contig length: old 567, new 567
New start: 0