No. words: 1063; after pruning: 1037


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.5 (1,1:494)  487  0.00 0.00 0.00  BE637806Tu02P027C01P027C071F1_054.ab1        3   491 (37)  C BE637806Tu02P027C01P027C071R1_054.ab1   (42)   493     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE637806Tu02P027C01P027C071R1_054.ab1   535 
   98    BE637806Tu02P027C01P027C071F1_054.ab1    58 
  110  C BE637806Tu02P027C01P027C071R1_054.ab1   426 
  158    BE637806Tu02P027C01P027C071F1_054.ab1   118 
  162  C BE637806Tu02P027C01P027C071R1_054.ab1   374 
  166    BE637806Tu02P027C01P027C071F1_054.ab1   126 
  182  C BE637806Tu02P027C01P027C071R1_054.ab1   354 
  278    BE637806Tu02P027C01P027C071F1_054.ab1   238 
  382  C BE637806Tu02P027C01P027C071R1_054.ab1   154 
  398    BE637806Tu02P027C01P027C071F1_054.ab1   358 
  406  C BE637806Tu02P027C01P027C071R1_054.ab1   130 
  426    BE637806Tu02P027C01P027C071F1_054.ab1   386 
  498  C BE637806Tu02P027C01P027C071R1_054.ab1    38 
  506    BE637806Tu02P027C01P027C071F1_054.ab1   466 
Contig length: old 568, new 568

Contig length: old 568, new 568
New start: 0