No. words: 1724; after pruning: 1684


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.1 (1,1:1399)  313  0.31 0.00 0.00  BE637850At01P027D01P027D071F1_033.ab1      505   828 (0)  C BE637850At01P027D01P027D071R1_033.ab1   (0)   896   573 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1    BE637850At01P027D01P027D071F1_033.ab1     1 
  674  C BE637850At01P027D01P027D071R1_033.ab1   727 
  682    BE637850At01P027D01P027D071F1_033.ab1   682 
  690  C BE637850At01P027D01P027D071R1_033.ab1   711 
  702    BE637850At01P027D01P027D071F1_033.ab1   702 
  714  C BE637850At01P027D01P027D071R1_033.ab1   687 
  737    BE637850At01P027D01P027D071F1_033.ab1   737 
  741  C BE637850At01P027D01P027D071R1_033.ab1   660 
  749    BE637850At01P027D01P027D071F1_033.ab1   749 
  757  C BE637850At01P027D01P027D071R1_033.ab1   644 
Contig length: old 1400, new 1400

Contig length: old 1400, new 1400
New start: 0