No. words: 1578; after pruning: 1552


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:1345)  218  0.86 0.00 0.00  BE637850Ld01P027D01P027D071F1_056.ab1      555   786 (0)  C BE637850Ld01P027D01P027D071R1_056.ab1   (0)   792   561 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  112 nodes

 58 str. conn. components

Path
    1    BE637850Ld01P027D01P027D071F1_056.ab1     1 
  653  C BE637850Ld01P027D01P027D071R1_056.ab1   694 
  661    BE637850Ld01P027D01P027D071F1_056.ab1   661 
  673  C BE637850Ld01P027D01P027D071R1_056.ab1   674 
  685    BE637850Ld01P027D01P027D071F1_056.ab1   685 
  697  C BE637850Ld01P027D01P027D071R1_056.ab1   650 
  713    BE637850Ld01P027D01P027D071F1_056.ab1   713 
  717  C BE637850Ld01P027D01P027D071R1_056.ab1   630 
Contig length: old 1346, new 1346

Contig length: old 1346, new 1346
New start: 0