No. words: 1413; after pruning: 1387


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:1216)  186  0.00 0.00 0.51  BE637850Ld03P027D01P027D071F1_052.ab1      504   700 (0)  C BE637850Ld03P027D01P027D071R1_052.ab1   (0)   713   518 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1    BE637850Ld03P027D01P027D071F1_052.ab1     1 
  598  C BE637850Ld03P027D01P027D071R1_052.ab1   620 
  610    BE637850Ld03P027D01P027D071F1_052.ab1   610 
  618  C BE637850Ld03P027D01P027D071R1_052.ab1   600 
  626    BE637850Ld03P027D01P027D071F1_052.ab1   626 
  630  C BE637850Ld03P027D01P027D071R1_052.ab1   588 
  634    BE637850Ld03P027D01P027D071F1_052.ab1   634 
  642  C BE637850Ld03P027D01P027D071R1_052.ab1   576 
Contig length: old 1217, new 1217

Contig length: old 1217, new 1217
New start: 0