No. words: 1506; after pruning: 1466


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.6 (1,1:1339)  161  0.60 0.00 0.00  BE637850Ld05P027D01P027D071F1_079.ab1      583   748 (0)  C BE637850Ld05P027D01P027D071R1_079.ab1   (0)   758   593 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1    BE637850Ld05P027D01P027D071F1_079.ab1     1 
  658  C BE637850Ld05P027D01P027D071R1_079.ab1   683 
  678    BE637850Ld05P027D01P027D071F1_079.ab1   678 
  690  C BE637850Ld05P027D01P027D071R1_079.ab1   651 
  706    BE637850Ld05P027D01P027D071F1_079.ab1   706 
  714  C BE637850Ld05P027D01P027D071R1_079.ab1   627 
Contig length: old 1340, new 1340

Contig length: old 1340, new 1340
New start: 0