No. words: 1532; after pruning: 1506


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.0 (1,1:1347)  179  0.00 0.00 0.00  BE637850Ld07P027D01P027D071F1_075.ab1      598   781 (0)  C BE637850Ld07P027D01P027D071R1_075.ab1   (0)   751   568 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1    BE637850Ld07P027D01P027D071F1_075.ab1     1 
  657  C BE637850Ld07P027D01P027D071R1_075.ab1   692 
  661    BE637850Ld07P027D01P027D071F1_075.ab1   661 
  673  C BE637850Ld07P027D01P027D071R1_075.ab1   676 
  681    BE637850Ld07P027D01P027D071F1_075.ab1   681 
  697  C BE637850Ld07P027D01P027D071R1_075.ab1   652 
  713    BE637850Ld07P027D01P027D071F1_075.ab1   713 
  721  C BE637850Ld07P027D01P027D071R1_075.ab1   628 
  749    BE637850Ld07P027D01P027D071F1_075.ab1   749 
  753  C BE637850Ld07P027D01P027D071R1_075.ab1   596 
Contig length: old 1348, new 1348

Contig length: old 1348, new 1348
New start: 0