No. words: 1527; after pruning: 1501


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:1317)  203  0.00 0.00 0.00  BE637850Ld09P027D01P027D071F1_071.ab1      562   770 (0)  C BE637850Ld09P027D01P027D071R1_071.ab1   (0)   757   549 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  106 nodes

 55 str. conn. components

Path
    1    BE637850Ld09P027D01P027D071F1_071.ab1     1 
  645  C BE637850Ld09P027D01P027D071R1_071.ab1   674 
  649    BE637850Ld09P027D01P027D071F1_071.ab1   649 
  661  C BE637850Ld09P027D01P027D071R1_071.ab1   658 
  673    BE637850Ld09P027D01P027D071F1_071.ab1   673 
  685  C BE637850Ld09P027D01P027D071R1_071.ab1   634 
  705    BE637850Ld09P027D01P027D071F1_071.ab1   705 
  709  C BE637850Ld09P027D01P027D071R1_071.ab1   610 
Contig length: old 1318, new 1318

Contig length: old 1318, new 1318
New start: 0