No. words: 1317; after pruning: 1277


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.4 (1,1:1114)  195  0.50 0.00 0.00  BE637850Ld12P027D01P027D071F1_065.ab1      443   644 (0)  C BE637850Ld12P027D01P027D071R1_065.ab1   (0)   673   472 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  100 nodes

 52 str. conn. components

Path
    1    BE637850Ld12P027D01P027D071F1_065.ab1     1 
  526  C BE637850Ld12P027D01P027D071R1_065.ab1   590 
  530    BE637850Ld12P027D01P027D071F1_065.ab1   530 
  542  C BE637850Ld12P027D01P027D071R1_065.ab1   574 
  554    BE637850Ld12P027D01P027D071F1_065.ab1   554 
  566  C BE637850Ld12P027D01P027D071R1_065.ab1   550 
  583    BE637850Ld12P027D01P027D071F1_065.ab1   583 
  591  C BE637850Ld12P027D01P027D071R1_065.ab1   525 
Contig length: old 1115, new 1115

Contig length: old 1115, new 1115
New start: 0