No. words: 1331; after pruning: 1305


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 11.4 (1,1:643)  606  0.94 0.00 0.00  BF145392As01P078E04P078E101F1_061.ab1        1   636 (7)  C BF145392As01P078E04P078E101R1_061.ab1   (44)   644     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BF145392As01P078E04P078E101R1_061.ab1   688 
   61    BF145392As01P078E04P078E101F1_061.ab1    17 
   73  C BF145392As01P078E04P078E101R1_061.ab1   616 
   77    BF145392As01P078E04P078E101F1_061.ab1    33 
   85  C BF145392As01P078E04P078E101R1_061.ab1   604 
   93    BF145392As01P078E04P078E101F1_061.ab1    49 
  105  C BF145392As01P078E04P078E101R1_061.ab1   584 
  129    BF145392As01P078E04P078E101F1_061.ab1    85 
  133  C BF145392As01P078E04P078E101R1_061.ab1   556 
  153    BF145392As01P078E04P078E101F1_061.ab1   109 
  157  C BF145392As01P078E04P078E101R1_061.ab1   532 
  206    BF145392As01P078E04P078E101F1_061.ab1   162 
  214  C BF145392As01P078E04P078E101R1_061.ab1   475 
  258    BF145392As01P078E04P078E101F1_061.ab1   214 
  262  C BF145392As01P078E04P078E101R1_061.ab1   427 
  311    BF145392As01P078E04P078E101F1_061.ab1   267 
  315  C BF145392As01P078E04P078E101R1_061.ab1   374 
Contig length: old 688, new 688

Contig length: old 688, new 688
New start: 0