No. words: 1327; after pruning: 1301


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 11.7 (1,1:637)  602  0.79 0.00 0.00  BF145392At01P078E04P078E101F1_057.ab1        1   631 (13)  C BF145392At01P078E04P078E101R1_057.ab1   (45)   638     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BF145392At01P078E04P078E101R1_057.ab1   683 
   57    BF145392At01P078E04P078E101F1_057.ab1    12 
  117  C BF145392At01P078E04P078E101R1_057.ab1   567 
  121    BF145392At01P078E04P078E101F1_057.ab1    76 
  137  C BF145392At01P078E04P078E101R1_057.ab1   547 
  149    BF145392At01P078E04P078E101F1_057.ab1   104 
  153  C BF145392At01P078E04P078E101R1_057.ab1   531 
  175    BF145392At01P078E04P078E101F1_057.ab1   130 
  179  C BF145392At01P078E04P078E101R1_057.ab1   505 
  203    BF145392At01P078E04P078E101F1_057.ab1   158 
  207  C BF145392At01P078E04P078E101R1_057.ab1   477 
  211    BF145392At01P078E04P078E101F1_057.ab1   166 
  219  C BF145392At01P078E04P078E101R1_057.ab1   465 
  255    BF145392At01P078E04P078E101F1_057.ab1   210 
  259  C BF145392At01P078E04P078E101R1_057.ab1   425 
  271    BF145392At01P078E04P078E101F1_057.ab1   226 
  275  C BF145392At01P078E04P078E101R1_057.ab1   409 
  670    BF145392At01P078E04P078E101F1_057.ab1   625 
Contig length: old 689, new 689

Contig length: old 689, new 689
New start: 0