No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:628)  616  0.00 0.00 0.00  BF145392Ld03P078E04P078E101F1_085.ab1        1   629 (86)  C BF145392Ld03P078E04P078E101R1_085.ab1   (11)   629     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BF145392Ld03P078E04P078E101R1_085.ab1   640 
   23    BF145392Ld03P078E04P078E101F1_085.ab1    12 
   47  C BF145392Ld03P078E04P078E101R1_085.ab1   594 
   51    BF145392Ld03P078E04P078E101F1_085.ab1    40 
   87  C BF145392Ld03P078E04P078E101R1_085.ab1   554 
   91    BF145392Ld03P078E04P078E101F1_085.ab1    80 
  107  C BF145392Ld03P078E04P078E101R1_085.ab1   534 
  127    BF145392Ld03P078E04P078E101F1_085.ab1   116 
  379  C BF145392Ld03P078E04P078E101R1_085.ab1   262 
  471    BF145392Ld03P078E04P078E101F1_085.ab1   460 
  479  C BF145392Ld03P078E04P078E101R1_085.ab1   162 
  567    BF145392Ld03P078E04P078E101F1_085.ab1   556 
  571  C BF145392Ld03P078E04P078E101R1_085.ab1    70 
  583    BF145392Ld03P078E04P078E101F1_085.ab1   572 
  587  C BF145392Ld03P078E04P078E101R1_085.ab1    54 
  595    BF145392Ld03P078E04P078E101F1_085.ab1   584 
  599  C BF145392Ld03P078E04P078E101R1_085.ab1    42 
  627    BF145392Ld03P078E04P078E101F1_085.ab1   616 
  631  C BF145392Ld03P078E04P078E101R1_085.ab1    10 
  635    BF145392Ld03P078E04P078E101F1_085.ab1   624 
Contig length: old 726, new 726

Contig length: old 726, new 726
New start: 0