No. words: 770; after pruning: 744


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    4   -3.0 -3.0 (1,1:489)  187  4.85 0.44 0.00  BF145392Sn27P137B06P078E101F1_021.ab1        5   231 (0)  C BF145392Sn27P137B06P078E101R1_021.ab1   (53)   486   259 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-3.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1  C BF145392Sn27P137B06P078E101R1_021.ab1   539 
   57    BF145392Sn27P137B06P078E101F1_021.ab1     8 
   61  C BF145392Sn27P137B06P078E101R1_021.ab1   479 
   99    BF145392Sn27P137B06P078E101F1_021.ab1    49 
  111  C BF145392Sn27P137B06P078E101R1_021.ab1   429 
Contig length: old 539, new 539

Contig length: old 539, new 539
New start: 0