No. words: 1055; after pruning: 1029


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.1 (1,1:476)  465  0.00 0.00 0.00  BF145392Td01P137B06P078E101F1_015.ab1        3   477 (55)  C BF145392Td01P137B06P078E101R1_015.ab1   (48)   475     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BF145392Td01P137B06P078E101R1_015.ab1   523 
   96    BF145392Td01P137B06P078E101F1_015.ab1    50 
  108  C BF145392Td01P137B06P078E101R1_015.ab1   416 
  116    BF145392Td01P137B06P078E101F1_015.ab1    70 
  120  C BF145392Td01P137B06P078E101R1_015.ab1   404 
  144    BF145392Td01P137B06P078E101F1_015.ab1    98 
  180  C BF145392Td01P137B06P078E101R1_015.ab1   344 
  184    BF145392Td01P137B06P078E101F1_015.ab1   138 
  196  C BF145392Td01P137B06P078E101R1_015.ab1   328 
  208    BF145392Td01P137B06P078E101F1_015.ab1   162 
  212  C BF145392Td01P137B06P078E101R1_015.ab1   312 
  352    BF145392Td01P137B06P078E101F1_015.ab1   306 
  360  C BF145392Td01P137B06P078E101R1_015.ab1   164 
  368    BF145392Td01P137B06P078E101F1_015.ab1   322 
  372  C BF145392Td01P137B06P078E101R1_015.ab1   152 
  376    BF145392Td01P137B06P078E101F1_015.ab1   330 
  384  C BF145392Td01P137B06P078E101R1_015.ab1   140 
  396    BF145392Td01P137B06P078E101F1_015.ab1   350 
  412  C BF145392Td01P137B06P078E101R1_015.ab1   112 
  424    BF145392Td01P137B06P078E101F1_015.ab1   378 
  428  C BF145392Td01P137B06P078E101R1_015.ab1    96 
  484    BF145392Td01P137B06P078E101F1_015.ab1   438 
  488  C BF145392Td01P137B06P078E101R1_015.ab1    36 
  508    BF145392Td01P137B06P078E101F1_015.ab1   462 
  512  C BF145392Td01P137B06P078E101R1_015.ab1    12 
  520    BF145392Td01P137B06P078E101F1_015.ab1   474 
Contig length: old 578, new 578

Contig length: old 578, new 578
New start: 0