No. words: 1037; after pruning: 1011


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.5 (1,1:484)  456  0.83 0.21 0.00  BF145392Td03P137B06P078E101F1_013.ab1        2   482 (18)  C BF145392Td03P137B06P078E101R1_013.ab1   (52)   485     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BF145392Td03P137B06P078E101R1_013.ab1   537 
   99    BF145392Td03P137B06P078E101F1_013.ab1    47 
  107  C BF145392Td03P137B06P078E101R1_013.ab1   431 
  111    BF145392Td03P137B06P078E101F1_013.ab1    59 
  115  C BF145392Td03P137B06P078E101R1_013.ab1   423 
  123    BF145392Td03P137B06P078E101F1_013.ab1    71 
  127  C BF145392Td03P137B06P078E101R1_013.ab1   411 
  147    BF145392Td03P137B06P078E101F1_013.ab1    95 
  163  C BF145392Td03P137B06P078E101R1_013.ab1   375 
  528    BF145392Td03P137B06P078E101F1_013.ab1   476 
Contig length: old 552, new 552

Contig length: old 552, new 552
New start: 0