No. words: 1051; after pruning: 1025


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.7 (1,1:488)  461  1.03 0.00 0.00  BF145392Td07P137B06P078E101F1_009.ab1        1   486 (18)  C BF145392Td07P137B06P078E101R1_009.ab1   (58)   489     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF145392Td07P137B06P078E101R1_009.ab1   547 
  107    BF145392Td07P137B06P078E101F1_009.ab1    49 
  123  C BF145392Td07P137B06P078E101R1_009.ab1   425 
  131    BF145392Td07P137B06P078E101F1_009.ab1    73 
  135  C BF145392Td07P137B06P078E101R1_009.ab1   413 
  540    BF145392Td07P137B06P078E101F1_009.ab1   482 
Contig length: old 562, new 562

Contig length: old 562, new 562
New start: 0