No. words: 1005; after pruning: 979


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 4.4 (1,1:486)  426  1.94 0.22 0.00  BF145392Td08P137B06P078E101F1_010.ab1        5   469 (3)  C BF145392Td08P137B06P078E101R1_010.ab1   (49)   484    19 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C BF145392Td08P137B06P078E101R1_010.ab1   533 
   53    BF145392Td08P137B06P078E101F1_010.ab1     8 
   57  C BF145392Td08P137B06P078E101R1_010.ab1   477 
   95    BF145392Td08P137B06P078E101F1_010.ab1    49 
  107  C BF145392Td08P137B06P078E101R1_010.ab1   427 
  115    BF145392Td08P137B06P078E101F1_010.ab1    69 
  123  C BF145392Td08P137B06P078E101R1_010.ab1   411 
  139    BF145392Td08P137B06P078E101F1_010.ab1    93 
  155  C BF145392Td08P137B06P078E101R1_010.ab1   379 
Contig length: old 533, new 533

Contig length: old 533, new 533
New start: 0