No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:631)  618  0.00 0.00 0.00  BF145392Tu01P078E04P078E101F1_034.ab1        1   632 (46)  C BF145392Tu01P078E04P078E101R1_034.ab1   (46)   632     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BF145392Tu01P078E04P078E101R1_034.ab1   678 
   90    BF145392Tu01P078E04P078E101F1_034.ab1    44 
  106  C BF145392Tu01P078E04P078E101R1_034.ab1   573 
  110    BF145392Tu01P078E04P078E101F1_034.ab1    64 
  114  C BF145392Tu01P078E04P078E101R1_034.ab1   565 
  122    BF145392Tu01P078E04P078E101F1_034.ab1    76 
  142  C BF145392Tu01P078E04P078E101R1_034.ab1   537 
  150    BF145392Tu01P078E04P078E101F1_034.ab1   104 
  158  C BF145392Tu01P078E04P078E101R1_034.ab1   521 
  174    BF145392Tu01P078E04P078E101F1_034.ab1   128 
  178  C BF145392Tu01P078E04P078E101R1_034.ab1   501 
  202    BF145392Tu01P078E04P078E101F1_034.ab1   156 
  214  C BF145392Tu01P078E04P078E101R1_034.ab1   465 
  238    BF145392Tu01P078E04P078E101F1_034.ab1   192 
  242  C BF145392Tu01P078E04P078E101R1_034.ab1   437 
  246    BF145392Tu01P078E04P078E101F1_034.ab1   200 
  262  C BF145392Tu01P078E04P078E101R1_034.ab1   417 
  270    BF145392Tu01P078E04P078E101F1_034.ab1   224 
  286  C BF145392Tu01P078E04P078E101R1_034.ab1   393 
  298    BF145392Tu01P078E04P078E101F1_034.ab1   252 
  302  C BF145392Tu01P078E04P078E101R1_034.ab1   377 
  310    BF145392Tu01P078E04P078E101F1_034.ab1   264 
  318  C BF145392Tu01P078E04P078E101R1_034.ab1   361 
  386    BF145392Tu01P078E04P078E101F1_034.ab1   340 
  390  C BF145392Tu01P078E04P078E101R1_034.ab1   289 
  430    BF145392Tu01P078E04P078E101F1_034.ab1   384 
  434  C BF145392Tu01P078E04P078E101R1_034.ab1   245 
  522    BF145392Tu01P078E04P078E101F1_034.ab1   476 
  526  C BF145392Tu01P078E04P078E101R1_034.ab1   153 
  570    BF145392Tu01P078E04P078E101F1_034.ab1   524 
  574  C BF145392Tu01P078E04P078E101R1_034.ab1   105 
  638    BF145392Tu01P078E04P078E101F1_034.ab1   592 
  642  C BF145392Tu01P078E04P078E101R1_034.ab1    37 
  662    BF145392Tu01P078E04P078E101F1_034.ab1   616 
  670  C BF145392Tu01P078E04P078E101R1_034.ab1     9 
  674    BF145392Tu01P078E04P078E101F1_034.ab1   628 
Contig length: old 724, new 724

Contig length: old 724, new 724
New start: 0