No. words: 1359; after pruning: 1333


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:632)  620  0.00 0.00 0.00  BF145392Tu02P078E04P078E101F1_063.ab1        1   633 (49)  C BF145392Tu02P078E04P078E101R1_063.ab1   (44)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BF145392Tu02P078E04P078E101R1_063.ab1   677 
   49    BF145392Tu02P078E04P078E101F1_063.ab1     5 
   53  C BF145392Tu02P078E04P078E101R1_063.ab1   625 
   61    BF145392Tu02P078E04P078E101F1_063.ab1    17 
   85  C BF145392Tu02P078E04P078E101R1_063.ab1   593 
   89    BF145392Tu02P078E04P078E101F1_063.ab1    45 
  141  C BF145392Tu02P078E04P078E101R1_063.ab1   537 
  149    BF145392Tu02P078E04P078E101F1_063.ab1   105 
  161  C BF145392Tu02P078E04P078E101R1_063.ab1   517 
  177    BF145392Tu02P078E04P078E101F1_063.ab1   133 
  181  C BF145392Tu02P078E04P078E101R1_063.ab1   497 
  205    BF145392Tu02P078E04P078E101F1_063.ab1   161 
  213  C BF145392Tu02P078E04P078E101R1_063.ab1   465 
  249    BF145392Tu02P078E04P078E101F1_063.ab1   205 
  265  C BF145392Tu02P078E04P078E101R1_063.ab1   413 
  273    BF145392Tu02P078E04P078E101F1_063.ab1   229 
  289  C BF145392Tu02P078E04P078E101R1_063.ab1   389 
  301    BF145392Tu02P078E04P078E101F1_063.ab1   257 
  305  C BF145392Tu02P078E04P078E101R1_063.ab1   373 
  313    BF145392Tu02P078E04P078E101F1_063.ab1   269 
  321  C BF145392Tu02P078E04P078E101R1_063.ab1   357 
  673    BF145392Tu02P078E04P078E101F1_063.ab1   629 
Contig length: old 726, new 726

Contig length: old 726, new 726
New start: 0