No. words: 1262; after pruning: 1236


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:594)  581  0.00 0.17 0.17  BF145691As01P027F01P027F071F1_011.ab1        1   595 (33)  C BF145691As01P027F01P027F071R1_011.ab1   (39)   595     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BF145691As01P027F01P027F071R1_011.ab1   634 
   69    BF145691As01P027F01P027F071F1_011.ab1    29 
   77  C BF145691As01P027F01P027F071R1_011.ab1   558 
   81    BF145691As01P027F01P027F071F1_011.ab1    41 
  125  C BF145691As01P027F01P027F071R1_011.ab1   510 
  133    BF145691As01P027F01P027F071F1_011.ab1    93 
  137  C BF145691As01P027F01P027F071R1_011.ab1   498 
  145    BF145691As01P027F01P027F071F1_011.ab1   105 
  149  C BF145691As01P027F01P027F071R1_011.ab1   486 
  173    BF145691As01P027F01P027F071F1_011.ab1   133 
  181  C BF145691As01P027F01P027F071R1_011.ab1   454 
  197    BF145691As01P027F01P027F071F1_011.ab1   157 
  253  C BF145691As01P027F01P027F071R1_011.ab1   382 
  269    BF145691As01P027F01P027F071F1_011.ab1   229 
  373  C BF145691As01P027F01P027F071R1_011.ab1   262 
  389    BF145691As01P027F01P027F071F1_011.ab1   349 
  545  C BF145691As01P027F01P027F071R1_011.ab1    90 
  549    BF145691As01P027F01P027F071F1_011.ab1   509 
  593  C BF145691As01P027F01P027F071R1_011.ab1    42 
  597    BF145691As01P027F01P027F071F1_011.ab1   557 
Contig length: old 667, new 668

Contig length: old 668, new 668
New start: 0