No. words: 1454; after pruning: 1428


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.1 (1,1:591)  575  0.00 0.34 0.00  BF145691Ld01P027F01P027F071F1_003.ab1        1   589 (145)  C BF145691Ld01P027F01P027F071R1_003.ab1   (127)   593     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BF145691Ld01P027F01P027F071R1_003.ab1   720 
  178    BF145691Ld01P027F01P027F071F1_003.ab1    50 
  190  C BF145691Ld01P027F01P027F071R1_003.ab1   531 
  362    BF145691Ld01P027F01P027F071F1_003.ab1   234 
Contig length: old 862, new 862

Contig length: old 862, new 862
New start: 0