No. words: 1453; after pruning: 1427


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.9 (1,1:591)  577  0.00 0.34 0.00  BF145691Ld05P027F01P027F071F1_012.ab1        1   589 (145)  C BF145691Ld05P027F01P027F071R1_012.ab1   (126)   593     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BF145691Ld05P027F01P027F071R1_012.ab1   719 
  327    BF145691Ld05P027F01P027F071F1_012.ab1   200 
  331  C BF145691Ld05P027F01P027F071R1_012.ab1   389 
  415    BF145691Ld05P027F01P027F071F1_012.ab1   288 
Contig length: old 861, new 861

Contig length: old 861, new 861
New start: 0