No. words: 1491; after pruning: 1465


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:589)  577  0.00 0.34 0.00  BF145691Ld08P027F01P027F071F1_006.ab1        1   589 (142)  C BF145691Ld08P027F01P027F071R1_006.ab1   (169)   591     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BF145691Ld08P027F01P027F071R1_006.ab1   760 
  270    BF145691Ld08P027F01P027F071F1_006.ab1   100 
  274  C BF145691Ld08P027F01P027F071R1_006.ab1   487 
  306    BF145691Ld08P027F01P027F071F1_006.ab1   136 
  314  C BF145691Ld08P027F01P027F071R1_006.ab1   447 
  478    BF145691Ld08P027F01P027F071F1_006.ab1   308 
Contig length: old 901, new 901

Contig length: old 901, new 901
New start: 0