No. words: 1254; after pruning: 1228


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.9 (1,1:580)  571  0.17 0.00 0.00  BF145691Tu02P027F01P027F071F1_013.ab1        1   580 (43)  C BF145691Tu02P027F01P027F071R1_013.ab1   (50)   581     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BF145691Tu02P027F01P027F071R1_013.ab1   631 
   82    BF145691Tu02P027F01P027F071F1_013.ab1    32 
  106  C BF145691Tu02P027F01P027F071R1_013.ab1   526 
  110    BF145691Tu02P027F01P027F071F1_013.ab1    60 
  126  C BF145691Tu02P027F01P027F071R1_013.ab1   506 
  138    BF145691Tu02P027F01P027F071F1_013.ab1    88 
  178  C BF145691Tu02P027F01P027F071R1_013.ab1   454 
  222    BF145691Tu02P027F01P027F071F1_013.ab1   172 
  311  C BF145691Tu02P027F01P027F071R1_013.ab1   321 
  351    BF145691Tu02P027F01P027F071F1_013.ab1   301 
  403  C BF145691Tu02P027F01P027F071R1_013.ab1   229 
  411    BF145691Tu02P027F01P027F071F1_013.ab1   361 
  439  C BF145691Tu02P027F01P027F071R1_013.ab1   193 
  455    BF145691Tu02P027F01P027F071F1_013.ab1   405 
Contig length: old 673, new 673

Contig length: old 673, new 673
New start: 0