No. words: 761; after pruning: 735


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:210)  205  0.00 0.47 0.00  BF146198Ld03P129A06P129A121F1_068.ab1        1   211 (172)  C BF146198Ld03P129A06P129A121R1_068.ab1   (166)   212     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1  C BF146198Ld03P129A06P129A121R1_068.ab1   378 
  256    BF146198Ld03P129A06P129A121F1_068.ab1    89 
  264  C BF146198Ld03P129A06P129A121R1_068.ab1   115 
  280    BF146198Ld03P129A06P129A121F1_068.ab1   113 
  300  C BF146198Ld03P129A06P129A121R1_068.ab1    79 
  304    BF146198Ld03P129A06P129A121F1_068.ab1   137 
Contig length: old 550, new 550

Contig length: old 550, new 550
New start: 0