No. words: 793; after pruning: 767


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.9 (1,1:227)  216  0.00 0.88 0.00  BF146198Ld08P129A06P129A121F1_089.ab1        2   227 (184)  C BF146198Ld08P129A06P129A121R1_089.ab1   (154)   228     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  108 nodes

 56 str. conn. components

Path
    1  C BF146198Ld08P129A06P129A121R1_089.ab1   382 
  260    BF146198Ld08P129A06P129A121F1_089.ab1   105 
  272  C BF146198Ld08P129A06P129A121R1_089.ab1   111 
  276    BF146198Ld08P129A06P129A121F1_089.ab1   121 
  340  C BF146198Ld08P129A06P129A121R1_089.ab1    43 
  344    BF146198Ld08P129A06P129A121F1_089.ab1   189 
Contig length: old 565, new 566

Contig length: old 566, new 566
New start: 0