No. words: 1792; after pruning: 1766


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.1 (1,1:922)  851  0.12 0.00 0.00  BF200549As01P027G01P027G071F1_003.ab1       13   881 (0)  C BF200549As01P027G01P027G071R1_003.ab1   (0)   911    43 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  432 nodes

 218 str. conn. components

Path
    1    BF200549As01P027G01P027G071F1_003.ab1     1 
  248  C BF200549As01P027G01P027G071R1_003.ab1   676 
  268    BF200549As01P027G01P027G071F1_003.ab1   268 
  272  C BF200549As01P027G01P027G071R1_003.ab1   652 
  276    BF200549As01P027G01P027G071F1_003.ab1   276 
  284  C BF200549As01P027G01P027G071R1_003.ab1   640 
Contig length: old 923, new 923

Contig length: old 923, new 923
New start: 0