No. words: 1827; after pruning: 1750


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.8 (1,1:908)  876  0.45 0.00 0.00  BF200549As02P027G01P027G071F1_004.ab1       14   909 (22)  C BF200549As02P027G01P027G071R1_004.ab1   (0)   896     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  438 nodes

 221 str. conn. components

Path
    1    BF200549As02P027G01P027G071F1_004.ab1     1 
  249  C BF200549As02P027G01P027G071R1_004.ab1   661 
  261    BF200549As02P027G01P027G071F1_004.ab1   261 
  273  C BF200549As02P027G01P027G071R1_004.ab1   637 
  277    BF200549As02P027G01P027G071F1_004.ab1   277 
  289  C BF200549As02P027G01P027G071R1_004.ab1   621 
  904    BF200549As02P027G01P027G071F1_004.ab1   904 
Contig length: old 931, new 931

Contig length: old 931, new 931
New start: 0