No. words: 1519; after pruning: 1493


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:893)  586  0.64 0.16 0.48  BF200549Ld03P027G01P027G071F1_067.ab1      105   729 (0)  C BF200549Ld03P027G01P027G071R1_067.ab1   (0)   790   168 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1    BF200549Ld03P027G01P027G071F1_067.ab1     1 
  248  C BF200549Ld03P027G01P027G071R1_067.ab1   647 
  268    BF200549Ld03P027G01P027G071F1_067.ab1   268 
  272  C BF200549Ld03P027G01P027G071R1_067.ab1   623 
  288    BF200549Ld03P027G01P027G071F1_067.ab1   288 
  300  C BF200549Ld03P027G01P027G071R1_067.ab1   595 
  308    BF200549Ld03P027G01P027G071F1_067.ab1   308 
  312  C BF200549Ld03P027G01P027G071R1_067.ab1   583 
  320    BF200549Ld03P027G01P027G071F1_067.ab1   320 
  324  C BF200549Ld03P027G01P027G071R1_067.ab1   571 
Contig length: old 894, new 894

Contig length: old 894, new 894
New start: 0