No. words: 1004; after pruning: 978


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:467)  441  0.64 0.21 0.43  BF200549Ta13P059G05P027G071F1_072.ab1        1   469 (31)  C BF200549Ta13P059G05P027G071R1_072.ab1   (36)   468     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BF200549Ta13P059G05P027G071R1_072.ab1   504 
  212    BF200549Ta13P059G05P027G071F1_072.ab1   175 
  220  C BF200549Ta13P059G05P027G071R1_072.ab1   285 
  256    BF200549Ta13P059G05P027G071F1_072.ab1   219 
  264  C BF200549Ta13P059G05P027G071R1_072.ab1   241 
  292    BF200549Ta13P059G05P027G071F1_072.ab1   255 
  308  C BF200549Ta13P059G05P027G071R1_072.ab1   197 
  312    BF200549Ta13P059G05P027G071F1_072.ab1   275 
  316  C BF200549Ta13P059G05P027G071R1_072.ab1   189 
  320    BF200549Ta13P059G05P027G071F1_072.ab1   283 
  376  C BF200549Ta13P059G05P027G071R1_072.ab1   129 
  384    BF200549Ta13P059G05P027G071F1_072.ab1   347 
  396  C BF200549Ta13P059G05P027G071R1_072.ab1   109 
  416    BF200549Ta13P059G05P027G071F1_072.ab1   379 
Contig length: old 536, new 537

Contig length: old 537, new 537
New start: 0