No. words: 975; after pruning: 949


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:444)  434  0.00 0.22 0.00  BF200549Ta20P059G05P027G071F1_089.ab1        1   445 (45)  C BF200549Ta20P059G05P027G071R1_089.ab1   (39)   446     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BF200549Ta20P059G05P027G071R1_089.ab1   485 
   75    BF200549Ta20P059G05P027G071F1_089.ab1    35 
   79  C BF200549Ta20P059G05P027G071R1_089.ab1   407 
   91    BF200549Ta20P059G05P027G071F1_089.ab1    51 
  103  C BF200549Ta20P059G05P027G071R1_089.ab1   383 
  119    BF200549Ta20P059G05P027G071F1_089.ab1    79 
  131  C BF200549Ta20P059G05P027G071R1_089.ab1   355 
  211    BF200549Ta20P059G05P027G071F1_089.ab1   171 
  247  C BF200549Ta20P059G05P027G071R1_089.ab1   239 
  251    BF200549Ta20P059G05P027G071F1_089.ab1   211 
Contig length: old 530, new 530

Contig length: old 530, new 530
New start: 0