No. words: 877; after pruning: 851


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.7 (1,1:277)  264  0.00 0.00 0.72  BF200563Ld05P027H01P027H071F1_076.ab1        1   279 (177)  C BF200563Ld05P027H01P027H071R1_076.ab1   (144)   277     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C BF200563Ld05P027H01P027H071R1_076.ab1   421 
  240    BF200563Ld05P027H01P027H071F1_076.ab1    96 
  268  C BF200563Ld05P027H01P027H071R1_076.ab1   154 
  316    BF200563Ld05P027H01P027H071F1_076.ab1   172 
  392  C BF200563Ld05P027H01P027H071R1_076.ab1    30 
  396    BF200563Ld05P027H01P027H071F1_076.ab1   252 
Contig length: old 599, new 600

Contig length: old 600, new 600
New start: 0