No. words: 374; after pruning: 348


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -0.8 -0.8 (1,1:108)   51 17.59 0.00 0.00  BF200563Ta22P027H01P059C061F1_021.ab1        1   108 (113)  C BF200563Ta22P027H01P059C061R1_021.ab1   (44)   109     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.8       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  14 nodes

 9 str. conn. components

Path
    1  C BF200563Ta22P027H01P059C061R1_021.ab1   153 
   56    BF200563Ta22P027H01P059C061F1_021.ab1    12 
   83  C BF200563Ta22P027H01P059C061R1_021.ab1    71 
  132    BF200563Ta22P027H01P059C061F1_021.ab1    88 
Contig length: old 265, new 265

Contig length: old 265, new 265
New start: 0 
S Change at: 88; seg lengths: entry 7, contig 7
S Change at: 113; seg lengths: entry 2, contig 2
S Change at: 120; seg lengths: entry 1, contig 1
S Change at: 128; seg lengths: entry 1, contig 1
S Change at: 137; seg lengths: entry 1, contig 1