No. words: 355; after pruning: 329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -1.0 -1.0 (1,1:108)   48 18.52 0.00 0.00  BF200563Ta24P027H01P059C061F1_017.ab1        1   108 (95)  C BF200563Ta24P027H01P059C061R1_017.ab1   (43)   109     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  14 nodes

 9 str. conn. components

Path
    1  C BF200563Ta24P027H01P059C061R1_017.ab1   152 
   55    BF200563Ta24P027H01P059C061F1_017.ab1    12 
Contig length: old 246, new 246

Contig length: old 246, new 246
New start: 0 
S Change at: 60; seg lengths: entry 3, contig 3
S Change at: 101; seg lengths: entry 1, contig 1
S Change at: 105; seg lengths: entry 4, contig 4
S Change at: 134; seg lengths: entry 3, contig 3
S Change at: 148; seg lengths: entry 1, contig 1