No. words: 472; after pruning: 446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.4 (1,1:182)  166  1.09 0.55 0.55  BF200563Ta24P059B06P027H071F1_002.ab1        1   183 (55)  C BF200563Ta24P059B06P027H071R1_002.ab1   (51)   183     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1  C BF200563Ta24P059B06P027H071R1_002.ab1   234 
   95    BF200563Ta24P059B06P027H071F1_002.ab1    43 
   99  C BF200563Ta24P059B06P027H071R1_002.ab1   136 
  107    BF200563Ta24P059B06P027H071F1_002.ab1    55 
  115  C BF200563Ta24P059B06P027H071R1_002.ab1   120 
  131    BF200563Ta24P059B06P027H071F1_002.ab1    79 
  139  C BF200563Ta24P059B06P027H071R1_002.ab1    96 
  147    BF200563Ta24P059B06P027H071F1_002.ab1    95 
  151  C BF200563Ta24P059B06P027H071R1_002.ab1    84 
  159    BF200563Ta24P059B06P027H071F1_002.ab1   107 
  167  C BF200563Ta24P059B06P027H071R1_002.ab1    68 
  175    BF200563Ta24P059B06P027H071F1_002.ab1   123 
Contig length: old 289, new 290

Contig length: old 290, new 290
New start: 0