No. words: 709; after pruning: 670


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.2 -2.2 (1,1:208)  181  0.47 0.47 1.89  BF200697As02P016F06F12F1_073.scf        1   212 (38)  C BF200697As02P016F06F12R1_073.ab1   (0)   209     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.2       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    3

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1  C BF200697As02P016F06F12R1_073.ab1   209 
   16    BF200697As02P016F06F12F1_073.scf    15 
Contig length: old 250, new 251

Contig length: old 251, new 251
New start: 0