No. words: 743; after pruning: 704


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.6 -1.6 (1,1:225)  186  0.00 0.48 1.44  BF200697Tu01P016F06F12F1_079.scf       21   228 (40)  C BF200697Tu01P016F06F12R1_079.ab1   (0)   207     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.6       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    3

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1  C BF200697Tu01P016F06F12R1_079.ab1   207 
   16    BF200697Tu01P016F06F12F1_079.scf    35 
Contig length: old 268, new 249

Contig length: old 249, new 249
New start: 0