No. words: 1542; after pruning: 1516 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 2 0.0 15.8 (1,1:746) 733 0.00 0.00 0.00 BF200774At01P003F06P003F121F1_065.ab1 3 747 (31) C BF200774At01P003F06P003F121R1_065.ab1 (19) 745 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 2 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 374 nodes 189 str. conn. components Path 1 C BF200774At01P003F06P003F121R1_065.ab1 764 43 BF200774At01P003F06P003F121F1_065.ab1 26 259 C BF200774At01P003F06P003F121R1_065.ab1 506 283 BF200774At01P003F06P003F121F1_065.ab1 266 291 C BF200774At01P003F06P003F121R1_065.ab1 474 319 BF200774At01P003F06P003F121F1_065.ab1 302 343 C BF200774At01P003F06P003F121R1_065.ab1 422 347 BF200774At01P003F06P003F121F1_065.ab1 330 371 C BF200774At01P003F06P003F121R1_065.ab1 394 459 BF200774At01P003F06P003F121F1_065.ab1 442 463 C BF200774At01P003F06P003F121R1_065.ab1 302 487 BF200774At01P003F06P003F121F1_065.ab1 470 495 C BF200774At01P003F06P003F121R1_065.ab1 270 579 BF200774At01P003F06P003F121F1_065.ab1 562 595 C BF200774At01P003F06P003F121R1_065.ab1 170 759 BF200774At01P003F06P003F121F1_065.ab1 742 Contig length: old 795, new 795 Contig length: old 795, new 795 New start: 0