No. words: 1513; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 14.7 (1,1:746)  710  0.68 0.00 0.14  BF200774At02P003F06P003F121F1_080.ab1        9   748 (22)  C BF200774At02P003F06P003F121R1_080.ab1   (4)   739     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1    BF200774At02P003F06P003F121F1_080.ab1     1 
  172  C BF200774At02P003F06P003F121R1_080.ab1   576 
  176    BF200774At02P003F06P003F121F1_080.ab1   176 
  288  C BF200774At02P003F06P003F121R1_080.ab1   460 
  300    BF200774At02P003F06P003F121F1_080.ab1   300 
  348  C BF200774At02P003F06P003F121R1_080.ab1   400 
  360    BF200774At02P003F06P003F121F1_080.ab1   360 
  432  C BF200774At02P003F06P003F121R1_080.ab1   316 
  440    BF200774At02P003F06P003F121F1_080.ab1   440 
  444  C BF200774At02P003F06P003F121R1_080.ab1   304 
  468    BF200774At02P003F06P003F121F1_080.ab1   468 
  492  C BF200774At02P003F06P003F121R1_080.ab1   256 
  500    BF200774At02P003F06P003F121F1_080.ab1   500 
  524  C BF200774At02P003F06P003F121R1_080.ab1   224 
  536    BF200774At02P003F06P003F121F1_080.ab1   536 
  540  C BF200774At02P003F06P003F121R1_080.ab1   208 
  552    BF200774At02P003F06P003F121F1_080.ab1   552 
  576  C BF200774At02P003F06P003F121R1_080.ab1   172 
  624    BF200774At02P003F06P003F121F1_080.ab1   624 
  628  C BF200774At02P003F06P003F121R1_080.ab1   120 
  644    BF200774At02P003F06P003F121F1_080.ab1   644 
  648  C BF200774At02P003F06P003F121R1_080.ab1   100 
  660    BF200774At02P003F06P003F121F1_080.ab1   660 
  684  C BF200774At02P003F06P003F121R1_080.ab1    64 
  696    BF200774At02P003F06P003F121F1_080.ab1   696 
  718  C BF200774At02P003F06P003F121R1_080.ab1    30 
  726    BF200774At02P003F06P003F121F1_080.ab1   726 
Contig length: old 770, new 770

Contig length: old 770, new 770
New start: 0