No. words: 1576; after pruning: 1536


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:841)  721  0.14 0.00 0.00  BF200774Ld07P003F06P003F121F1_020.ab1       66   799 (0)  C BF200774Ld07P003F06P003F121R1_020.ab1   (0)   777    44 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1    BF200774Ld07P003F06P003F121F1_020.ab1     1 
  289  C BF200774Ld07P003F06P003F121R1_020.ab1   554 
  293    BF200774Ld07P003F06P003F121F1_020.ab1   293 
  301  C BF200774Ld07P003F06P003F121R1_020.ab1   542 
  305    BF200774Ld07P003F06P003F121F1_020.ab1   305 
  325  C BF200774Ld07P003F06P003F121R1_020.ab1   518 
  337    BF200774Ld07P003F06P003F121F1_020.ab1   337 
  349  C BF200774Ld07P003F06P003F121R1_020.ab1   494 
  361    BF200774Ld07P003F06P003F121F1_020.ab1   361 
  401  C BF200774Ld07P003F06P003F121R1_020.ab1   442 
  453    BF200774Ld07P003F06P003F121F1_020.ab1   453 
  469  C BF200774Ld07P003F06P003F121R1_020.ab1   374 
  577    BF200774Ld07P003F06P003F121F1_020.ab1   577 
  581  C BF200774Ld07P003F06P003F121R1_020.ab1   262 
Contig length: old 842, new 842

Contig length: old 842, new 842
New start: 0