No. words: 1568; after pruning: 1528


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:848)  706  0.14 0.00 0.00  BF200774Ld08P003F06P003F121F1_018.ab1       63   781 (0)  C BF200774Ld08P003F06P003F121R1_018.ab1   (0)   787    69 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1    BF200774Ld08P003F06P003F121F1_018.ab1     1 
  330  C BF200774Ld08P003F06P003F121R1_018.ab1   520 
  338    BF200774Ld08P003F06P003F121F1_018.ab1   338 
  350  C BF200774Ld08P003F06P003F121R1_018.ab1   500 
  362    BF200774Ld08P003F06P003F121F1_018.ab1   362 
  370  C BF200774Ld08P003F06P003F121R1_018.ab1   480 
  382    BF200774Ld08P003F06P003F121F1_018.ab1   382 
  394  C BF200774Ld08P003F06P003F121R1_018.ab1   456 
Contig length: old 849, new 849

Contig length: old 849, new 849
New start: 0