No. words: 1604; after pruning: 1550


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.7 (1,1:843)  744  0.39 0.00 0.00  BF200774Ld10P003F06P003F121F1_045.ab1       51   810 (0)  C BF200774Ld10P003F06P003F121R1_045.ab1   (0)   794    35 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    BF200774Ld10P003F06P003F121F1_045.ab1     1 
  331  C BF200774Ld10P003F06P003F121R1_045.ab1   514 
  343    BF200774Ld10P003F06P003F121F1_045.ab1   343 
  351  C BF200774Ld10P003F06P003F121R1_045.ab1   494 
  363    BF200774Ld10P003F06P003F121F1_045.ab1   363 
  371  C BF200774Ld10P003F06P003F121R1_045.ab1   474 
  403    BF200774Ld10P003F06P003F121F1_045.ab1   403 
  427  C BF200774Ld10P003F06P003F121R1_045.ab1   418 
Contig length: old 844, new 844

Contig length: old 844, new 844
New start: 0 
S Change at: 807; seg lengths: entry 1, contig 1