No. words: 1545; after pruning: 1505


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:854)  677  0.29 0.00 0.00  BF200774Tu01P003F06P003F121F1_073.ab1       83   772 (0)  C BF200774Tu01P003F06P003F121R1_073.ab1   (0)   773    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1    BF200774Tu01P003F06P003F121F1_073.ab1     1 
  348  C BF200774Tu01P003F06P003F121R1_073.ab1   508 
  356    BF200774Tu01P003F06P003F121F1_073.ab1   356 
  360  C BF200774Tu01P003F06P003F121R1_073.ab1   496 
  364    BF200774Tu01P003F06P003F121F1_073.ab1   364 
  368  C BF200774Tu01P003F06P003F121R1_073.ab1   488 
  372    BF200774Tu01P003F06P003F121F1_073.ab1   372 
  408  C BF200774Tu01P003F06P003F121R1_073.ab1   448 
  420    BF200774Tu01P003F06P003F121F1_073.ab1   420 
  508  C BF200774Tu01P003F06P003F121R1_073.ab1   348 
Contig length: old 855, new 855

Contig length: old 855, new 855
New start: 0