No. words: 1765; after pruning: 1725


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:1164)  577  0.17 0.00 0.00  BF200942Sn25P034D07P003F101F1_080.ab1      274   873 (0)  C BF200942Sn25P034D07P003F101R1_080.ab1   (0)   892   293 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1    BF200942Sn25P034D07P003F101F1_080.ab1     1 
  481  C BF200942Sn25P034D07P003F101R1_080.ab1   685 
  485    BF200942Sn25P034D07P003F101F1_080.ab1   485 
  540  C BF200942Sn25P034D07P003F101R1_080.ab1   626 
Contig length: old 1165, new 1165

Contig length: old 1165, new 1165
New start: 0