No. words: 1682; after pruning: 1642


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:1146)  514  0.19 0.00 0.00  BF200942Sn26P034D07P003F101F1_078.ab1      239   773 (0)  C BF200942Sn26P034D07P003F101R1_078.ab1   (0)   909   375 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1    BF200942Sn26P034D07P003F101F1_078.ab1     1 
  462  C BF200942Sn26P034D07P003F101R1_078.ab1   686 
  466    BF200942Sn26P034D07P003F101F1_078.ab1   466 
  503  C BF200942Sn26P034D07P003F101R1_078.ab1   645 
Contig length: old 1147, new 1147

Contig length: old 1147, new 1147
New start: 0