No. words: 1790; after pruning: 1736


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:1163)  592  0.48 0.16 0.00  BF200942Sn27P034D07P003F101F1_076.ab1      285   909 (0)  C BF200942Sn27P034D07P003F101R1_076.ab1   (0)   881   256 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1    BF200942Sn27P034D07P003F101F1_076.ab1     1 
  447  C BF200942Sn27P034D07P003F101R1_076.ab1   718 
  451    BF200942Sn27P034D07P003F101F1_076.ab1   451 
  508  C BF200942Sn27P034D07P003F101R1_076.ab1   657 
  512    BF200942Sn27P034D07P003F101F1_076.ab1   512 
  520  C BF200942Sn27P034D07P003F101R1_076.ab1   645 
  532    BF200942Sn27P034D07P003F101F1_076.ab1   532 
  536  C BF200942Sn27P034D07P003F101R1_076.ab1   629 
  608    BF200942Sn27P034D07P003F101F1_076.ab1   608 
  616  C BF200942Sn27P034D07P003F101R1_076.ab1   549 
Contig length: old 1164, new 1164

Contig length: old 1164, new 1164
New start: 0