No. words: 1703; after pruning: 1649


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:1157)  519  0.18 0.18 0.00  BF200942Sn28P034D07P003F101F1_074.ab1      279   822 (0)  C BF200942Sn28P034D07P003F101R1_074.ab1   (0)   881   337 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    BF200942Sn28P034D07P003F101F1_074.ab1     1 
  463  C BF200942Sn28P034D07P003F101R1_074.ab1   696 
  467    BF200942Sn28P034D07P003F101F1_074.ab1   467 
  483  C BF200942Sn28P034D07P003F101R1_074.ab1   676 
  487    BF200942Sn28P034D07P003F101F1_074.ab1   487 
  520  C BF200942Sn28P034D07P003F101R1_074.ab1   639 
  532    BF200942Sn28P034D07P003F101F1_074.ab1   532 
  536  C BF200942Sn28P034D07P003F101R1_074.ab1   623 
  548    BF200942Sn28P034D07P003F101F1_074.ab1   548 
  552  C BF200942Sn28P034D07P003F101R1_074.ab1   607 
Contig length: old 1158, new 1158

Contig length: old 1158, new 1158
New start: 0