No. words: 1417; after pruning: 1391


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:964)  430  0.44 0.00 0.00  BF200942Sn30P034H06P003F101F1_013.ab1      242   693 (0)  C BF200942Sn30P034H06P003F101R1_013.ab1   (0)   724   273 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1    BF200942Sn30P034H06P003F101F1_013.ab1     1 
  265  C BF200942Sn30P034H06P003F101R1_013.ab1   701 
  269    BF200942Sn30P034H06P003F101F1_013.ab1   269 
  289  C BF200942Sn30P034H06P003F101R1_013.ab1   677 
  297    BF200942Sn30P034H06P003F101F1_013.ab1   297 
  317  C BF200942Sn30P034H06P003F101R1_013.ab1   649 
  325    BF200942Sn30P034H06P003F101F1_013.ab1   325 
  361  C BF200942Sn30P034H06P003F101R1_013.ab1   605 
  365    BF200942Sn30P034H06P003F101F1_013.ab1   365 
  401  C BF200942Sn30P034H06P003F101R1_013.ab1   565 
  405    BF200942Sn30P034H06P003F101F1_013.ab1   405 
  409  C BF200942Sn30P034H06P003F101R1_013.ab1   557 
  413    BF200942Sn30P034H06P003F101F1_013.ab1   413 
  429  C BF200942Sn30P034H06P003F101R1_013.ab1   537 
  433    BF200942Sn30P034H06P003F101F1_013.ab1   433 
  441  C BF200942Sn30P034H06P003F101R1_013.ab1   525 
  449    BF200942Sn30P034H06P003F101F1_013.ab1   449 
  457  C BF200942Sn30P034H06P003F101R1_013.ab1   509 
Contig length: old 965, new 965

Contig length: old 965, new 965
New start: 0