No. words: 1667; after pruning: 1641


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:1163)  479  0.40 0.00 0.00  BF200942Ta14P034D07P003F101F1_054.ab1      291   793 (0)  C BF200942Ta14P034D07P003F101R1_054.ab1   (0)   874   372 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1    BF200942Ta14P034D07P003F101F1_054.ab1     1 
  510  C BF200942Ta14P034D07P003F101R1_054.ab1   655 
  514    BF200942Ta14P034D07P003F101F1_054.ab1   514 
  522  C BF200942Ta14P034D07P003F101R1_054.ab1   643 
  530    BF200942Ta14P034D07P003F101F1_054.ab1   530 
  555  C BF200942Ta14P034D07P003F101R1_054.ab1   610 
Contig length: old 1164, new 1164

Contig length: old 1164, new 1164
New start: 0